More than 185,000 people have been affected by the typhoon with over 43,000 taking refuge in evacuation centers, the NDRRMC said Friday.
The agency said 147 cities and municipalities experienced power outages, and by Friday, 31 of those had power restored.
Phanfone swept west across the islands of the Eastern Visayas region, southern Luzon and Western Visayas on Wednesday, toppling electricity pylons and trees, tearing off roofs, damaging more than 2,000 homes and causing widespread travel disruption over the busy Christmas period.
The region is majority Catholic, and many people were preparing for family celebrations when the typhoon hit. Images from the area showed debris blocking roads, downed lamp posts, crumpled houses and people huddling in evacuation centers.
Some tourist areas, including the popular resort island of Boracay, were also damaged on Wednesday. The nearby Kalibo International Airport was temporarily closed and flights canceled after the typhoon damaged the roof of the terminal building, according to an advisory from Philippine Airlines.
Thousands of people who were traveling over the Christmas period had their flights and ferries canceled due to the typhoon. Some 115 domestic flights were canceled and more than 15,700 passengers left stranded, the NDRRMC said earlier.
The Philippines gets hit by more typhoons than any other country, according to the Philippine Atmospheric, Geophysical and Astronomical Services Administration (PAGASA).
Earlier this month Typhoon Kammuri
, the twentieth to hit the country this year, killed 13 people
and damaged more than 8,000 houses.
On Friday, Phanfone was tracking over the South China Sea with winds of 120 kph (75 mph). The storm is expected to weaken to a tropical depression before making landfall in northern Vietnam on Sunday, according to CNN meteorologists.